Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | EEJ33_15275 | Not Available | - | 3259910 - 3260845 | 35392.4 |
| mltr family transcriptional regulator | EEJ33_15280 | Not Available | - | 3260960 - 3261541 | 21971.6 |
| mannitol-1-phosphate 5-dehydrogenase | EEJ33_15285 | Not Available | - | 3261629 - 3262783 | 42589.2 |
| pts mannitol transporter subunit iicba | EEJ33_15290 | Not Available | - | 3262884 - 3264833 | 68606.1 |
| phospho-sugar mutase | EEJ33_15295 | Not Available | - | 3265507 - 3267210 | 61958.4 |
| amino acid abc transporter permease | EEJ33_15300 | Not Available | - | 3267449 - 3268345 | 33327.2 |
| amino acid abc transporter substrate-binding protein | EEJ33_15305 | Not Available | - | 3268346 - 3269182 | 30801.7 |
| amino acid abc transporter permease | EEJ33_15310 | Not Available | - | 3269218 - 3270018 | 29645.7 |
| amino acid abc transporter atp-binding protein | EEJ33_15315 | Not Available | - | 3270015 - 3270734 | 26910.7 |
| 3-deoxy-7-phosphoheptulonate synthase | EEJ33_15320 | Not Available | + | 3271036 - 3272088 | 38562.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


