Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein-sorting protein | EEJ33_15170 | Not Available | - | 3240305 - 3241078 | 29892.1 |
| fis family transcriptional regulator | EEJ33_15175 | Not Available | + | 3241253 - 3243577 | 84834.6 |
| helix-turn-helix transcriptional regulator | EEJ33_15180 | Not Available | - | 3243683 - 3244357 | 25850.7 |
| duf2618 domain-containing protein | EEJ33_15185 | Not Available | + | 3244969 - 3245085 | 4714.8 |
| ornithine decarboxylase spef | EEJ33_15190 | Not Available | + | 3245424 - 3247586 | 81369.5 |
| putrescine-ornithine antiporter | EEJ33_15195 | Not Available | + | 3247654 - 3248973 | 46269.1 |
| histidine kinase | EEJ33_15200 | Not Available | - | 3248995 - 3249126 | 4986.2 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | EEJ33_15205 | Not Available | + | 3249433 - 3250089 | 23584.5 |
| trna (pseudouridine(54)-n(1))-methyltransferase trmy | EEJ33_15210 | Not Available | - | 3250155 - 3250772 | 22810.8 |
| lysr family transcriptional regulator | EEJ33_15215 | Not Available | - | 3250866 - 3251771 | 34267.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


