Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pega domain-containing protein | EEJ33_15120 | Not Available | - | 3225923 - 3227068 | 43386.4 |
| arac family transcriptional regulator | EEJ33_15125 | Not Available | + | 3227429 - 3228292 | 31489.9 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | EEJ33_15130 | Not Available | + | 3228632 - 3231751 | 114934.0 |
| 1-pyrroline-5-carboxylate dehydrogenase | EEJ33_15135 | Not Available | + | 3231773 - 3232471 | 25020.8 |
| sodium/proline symporter putp | EEJ33_15140 | Not Available | + | 3232544 - 3234094 | 55375.0 |
| hypothetical protein | EEJ33_15145 | Not Available | + | 3234278 - 3234499 | 8752.65 |
| methyl-accepting chemotaxis protein | EEJ33_15150 | Not Available | + | 3234797 - 3236716 | 69617.3 |
| lrp/asnc family transcriptional regulator | EEJ33_15155 | Not Available | + | 3236914 - 3237396 | 18054.9 |
| coniferyl aldehyde dehydrogenase | EEJ33_15160 | Not Available | + | 3237572 - 3239014 | 53160.8 |
| malate transporter | EEJ33_15165 | Not Available | - | 3239136 - 3240305 | 44501.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


