Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor antagonist | EEJ33_15070 | Not Available | + | 3211779 - 3212078 | 11515.0 |
| response regulator | EEJ33_15075 | Not Available | + | 3212101 - 3213807 | 64380.6 |
| duf342 domain-containing protein | EEJ33_15080 | Not Available | + | 3214079 - 3215749 | 60521.2 |
| type i secretion system permease/atpase | EEJ33_15085 | Not Available | - | 3215867 - 3217981 | 78536.2 |
| eal domain-containing protein | EEJ33_15090 | Not Available | - | 3217996 - 3219906 | 71925.1 |
| sulfate adenylyltransferase | EEJ33_15095 | Not Available | - | 3219912 - 3220574 | 25184.2 |
| hlyd family type i secretion periplasmic adaptor subunit | EEJ33_15100 | Not Available | - | 3220584 - 3221975 | 52015.2 |
| pyridoxamine 5'-phosphate oxidase | EEJ33_15105 | Not Available | + | 3222199 - 3222834 | 24466.1 |
| pas domain s-box protein | EEJ33_15110 | Not Available | - | 3222841 - 3223602 | 28436.2 |
| pega domain-containing protein | EEJ33_15115 | Not Available | - | 3223909 - 3225762 | 68950.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


