Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3346 domain-containing protein | EEJ33_14970 | Not Available | - | 3188333 - 3190309 | 75209.6 |
| hypothetical protein | EEJ33_14975 | Not Available | + | 3191118 - 3191330 | 8418.77 |
| para family protein | EEJ33_14980 | Not Available | + | 3191542 - 3192759 | 46211.5 |
| parb/repb/spo0j family partition protein | EEJ33_14985 | Not Available | + | 3192767 - 3193738 | 35910.3 |
| spermidine/putrescine abc transporter substrate-binding protein | EEJ33_14990 | Not Available | - | 3193797 - 3194828 | 38720.2 |
| trna(met) cytidine acetyltransferase | EEJ33_14995 | Not Available | + | 3195050 - 3197068 | 75302.1 |
| abc transporter atp-binding protein | EEJ33_15000 | Not Available | - | 3197229 - 3198689 | 52721.9 |
| abc transporter permease | EEJ33_15005 | Not Available | - | 3198608 - 3199420 | 30276.9 |
| abc transporter permease | EEJ33_15010 | Not Available | - | 3199401 - 3200357 | 35035.6 |
| abc transporter substrate-binding protein | EEJ33_15015 | Not Available | - | 3200350 - 3201918 | 57414.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


