Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-alpha-glucanotransferase | EEJ33_14915 | Not Available | - | 3174332 - 3176512 | 81387.8 |
| glycogen/starch/alpha-glucan phosphorylase | EEJ33_14920 | Not Available | - | 3176598 - 3179051 | 92557.8 |
| hth-type transcriptional regulator malt | EEJ33_14925 | Not Available | + | 3179571 - 3182336 | 106032.0 |
| yibl family ribosome-associated protein | EEJ33_14930 | Not Available | - | 3182402 - 3182758 | 13380.5 |
| methyl-accepting chemotaxis protein | EEJ33_14940 | Not Available | + | 3183039 - 3184700 | 60870.4 |
| nad(p)-dependent oxidoreductase | EEJ33_14945 | Not Available | - | 3184804 - 3185754 | 33639.6 |
| yebc/pmpr family dna-binding transcriptional regulator | EEJ33_14950 | Not Available | - | 3185794 - 3186513 | 26332.0 |
| duf3283 family protein | EEJ33_14955 | Not Available | - | 3186601 - 3186879 | 10575.0 |
| hypothetical protein | EEJ33_14960 | Not Available | - | 3187099 - 3187296 | 7533.86 |
| transcriptional regulator | EEJ33_14965 | Not Available | + | 3187657 - 3188118 | 17834.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


