Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sel1 repeat family protein | EEJ33_14865 | Not Available | - | 3159187 - 3160242 | 40559.4 |
| sel1 repeat family protein | EEJ33_14870 | Not Available | - | 3160250 - 3161299 | 40055.7 |
| sel1 repeat family protein | EEJ33_14875 | Not Available | - | 3161309 - 3162412 | 41886.1 |
| sel1 repeat family protein | EEJ33_14880 | Not Available | - | 3162425 - 3163477 | 40465.4 |
| sel1 repeat family protein | EEJ33_14885 | Not Available | - | 3163485 - 3164591 | 42778.8 |
| lysm domain-containing protein | EEJ33_14890 | Not Available | - | 3164575 - 3168264 | 135675.0 |
| duf4123 domain-containing protein | EEJ33_14895 | Not Available | - | 3168267 - 3168794 | 20049.8 |
| type vi secretion system tip protein vgrg | EEJ33_14900 | Not Available | - | 3168791 - 3170887 | 77375.8 |
| hcp family type vi secretion system effector | EEJ33_14905 | Not Available | - | 3171015 - 3171533 | 19044.3 |
| 1,4-alpha-glucan branching protein glgb | EEJ33_14910 | Not Available | - | 3171923 - 3174112 | 83959.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


