Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | EEJ33_14740 | Not Available | - | 3132498 - 3133250 | 28698.2 |
| phox family phosphatase | EEJ33_14745 | Not Available | - | 3133392 - 3135269 | 69108.4 |
| arginase | EEJ33_14750 | Not Available | - | 3135464 - 3136306 | 31361.8 |
| iclr family transcriptional regulator | EEJ33_14755 | Not Available | - | 3136307 - 3137041 | 27105.1 |
| chitinase | EEJ33_14765 | Not Available | - | 3137418 - 3139964 | 90110.5 |
| duf2057 domain-containing protein | EEJ33_14770 | Not Available | + | 3140404 - 3141039 | 23618.2 |
| dass family sodium-coupled anion symporter | EEJ33_14775 | Not Available | - | 3141136 - 3142524 | 49460.0 |
| aec family transporter | EEJ33_14780 | Not Available | + | 3142802 - 3143794 | 35473.2 |
| acyltransferase | EEJ33_14785 | Not Available | + | 3143910 - 3144950 | 39091.1 |
| hypothetical protein | EEJ33_14790 | Not Available | - | 3145012 - 3145398 | 14311.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


