Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | EEJ33_14690 | Not Available | + | 3120017 - 3121597 | 60195.7 |
| protease | EEJ33_14695 | Not Available | - | 3121791 - 3125045 | 121516.0 |
| n-acetyltransferase | EEJ33_14700 | Not Available | - | 3125278 - 3125562 | 10737.9 |
| flagellar brake protein | EEJ33_14705 | Not Available | + | 3125694 - 3126452 | 28383.2 |
| sodium/glutamate symporter | EEJ33_14710 | Not Available | - | 3126530 - 3127756 | 43853.8 |
| duf368 domain-containing protein | EEJ33_14715 | Not Available | + | 3128295 - 3129221 | 34052.0 |
| hypothetical protein | EEJ33_14720 | Not Available | + | 3129420 - 3129842 | 15182.2 |
| sco family protein | EEJ33_14725 | Not Available | + | 3129839 - 3130420 | 21599.0 |
| copper chaperone pcu(a)c | EEJ33_14730 | Not Available | + | 3130434 - 3130886 | 16445.2 |
| serine/threonine transporter sstt | EEJ33_14735 | Not Available | + | 3131228 - 3132445 | 42387.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


