Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | EEJ33_14640 | Not Available | - | 3109670 - 3111028 | 50423.8 |
| hypothetical protein | EEJ33_14645 | Not Available | + | 3111406 - 3111654 | 8366.84 |
| lysm peptidoglycan-binding domain-containing protein | EEJ33_14650 | Not Available | - | 3111740 - 3112660 | 34081.4 |
| deoxyribodipyrimidine photo-lyase | EEJ33_14655 | Not Available | - | 3112669 - 3114078 | 54325.1 |
| merr family transcriptional regulator | EEJ33_14660 | Not Available | - | 3114088 - 3114885 | 29318.6 |
| duf523 and duf1722 domain-containing protein | EEJ33_14665 | Not Available | - | 3114875 - 3115843 | 36793.9 |
| hypothetical protein | EEJ33_14670 | Not Available | + | 3115885 - 3116064 | 6943.41 |
| purine-nucleoside phosphorylase | EEJ33_14675 | Not Available | + | 3116150 - 3116860 | 25641.1 |
| is1 family transposase | EEJ33_14680 | Not Available | + | 3116925 - 3118394 | 56023.7 |
| hypothetical protein | EEJ33_14685 | Not Available | + | 3118513 - 3120036 | 58702.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


