Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EEJ33_14530 | Not Available | - | 3083060 - 3083440 | 14420.0 |
| mfs transporter | EEJ33_14535 | Not Available | - | 3083543 - 3084754 | 43681.6 |
| lysr family transcriptional regulator | EEJ33_14540 | Not Available | + | 3084844 - 3085731 | 33370.2 |
| ggdef domain-containing protein | EEJ33_14545 | Not Available | + | 3085954 - 3087777 | 69723.7 |
| peptidase m23 | EEJ33_14550 | Not Available | - | 3087894 - 3089186 | 48416.4 |
| 1,4-alpha-glucan branching protein | EEJ33_14560 | Not Available | - | 3089378 - 3089710 | 12962.5 |
| stas domain-containing protein | EEJ33_14565 | Not Available | + | 3090015 - 3091676 | 58565.2 |
| yjih family protein | EEJ33_14570 | Not Available | + | 3092113 - 3093489 | 49245.5 |
| oxidoreductase | EEJ33_14580 | Not Available | + | 3093773 - 3094240 | 18021.8 |
| ggdef domain-containing protein | EEJ33_14585 | Not Available | + | 3094237 - 3095337 | 42034.1 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


