Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate synthase | EEJ33_14430 | Not Available | + | 3061815 - 3064226 | 88569.9 |
| pas domain s-box protein | EEJ33_14435 | Not Available | + | 3064406 - 3065953 | 56805.3 |
| mate family efflux transporter | EEJ33_14440 | Not Available | + | 3066166 - 3067494 | 47667.1 |
| dead/deah box helicase | EEJ33_14445 | Not Available | - | 3067528 - 3068814 | 46401.3 |
| amidinotransferase | EEJ33_14450 | Not Available | - | 3069058 - 3070038 | 36180.8 |
| multidrug efflux abc transporter vcam | EEJ33_14455 | Not Available | + | 3070401 - 3072260 | 68683.8 |
| duf445 domain-containing protein | EEJ33_14460 | Not Available | + | 3072391 - 3073116 | 26484.5 |
| alkene reductase | EEJ33_14465 | Not Available | - | 3073201 - 3074244 | 38313.3 |
| tetr/acrr family transcriptional regulator | EEJ33_14470 | Not Available | + | 3074395 - 3074970 | 21668.3 |
| lyse family translocator | EEJ33_14475 | Not Available | - | 3075042 - 3075671 | 22452.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


