Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EEJ33_14380 | Not Available | + | 3048065 - 3048559 | 19140.9 |
| abc transporter atp-binding protein | EEJ33_14385 | Not Available | + | 3048588 - 3050207 | 60136.3 |
| amino acid abc transporter substrate-binding protein | EEJ33_14390 | Not Available | - | 3050374 - 3051105 | 26720.8 |
| methyl-accepting chemotaxis protein | EEJ33_14395 | Not Available | - | 3051125 - 3052009 | 31914.3 |
| abc transporter | EEJ33_14400 | Not Available | - | 3052834 - 3053577 | 27519.9 |
| lysr family transcriptional regulator | EEJ33_14405 | Not Available | - | 3053731 - 3054630 | 33089.8 |
| l-lactate permease | EEJ33_14410 | Not Available | + | 3054782 - 3056530 | 61403.6 |
| alpha-hydroxy-acid oxidizing protein | EEJ33_14415 | Not Available | + | 3056651 - 3057787 | 41374.3 |
| fad-binding oxidoreductase | EEJ33_14420 | Not Available | + | 3057884 - 3060763 | 105353.0 |
| kinase/pyrophosphorylase | EEJ33_14425 | Not Available | - | 3060847 - 3061680 | 31843.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


