Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3541 domain-containing protein | EEJ33_14330 | Not Available | + | 3036749 - 3037957 | 45556.1 |
| dmt family transporter | EEJ33_14335 | Not Available | - | 3037982 - 3038905 | 33875.6 |
| lysr family transcriptional regulator | EEJ33_14340 | Not Available | + | 3039006 - 3039911 | 33881.5 |
| ggdef domain-containing protein | EEJ33_14345 | Not Available | + | 3040063 - 3041253 | 45189.6 |
| hypothetical protein | EEJ33_14350 | Not Available | - | 3041256 - 3041552 | 11303.7 |
| pirin family protein | EEJ33_14355 | Not Available | + | 3041728 - 3042576 | 31358.4 |
| pyrimidine/purine nucleoside phosphorylase | EEJ33_14360 | Not Available | - | 3042714 - 3043028 | 11326.3 |
| duf2850 domain-containing protein | EEJ33_14365 | Not Available | + | 3043413 - 3043853 | 16767.8 |
| mfs transporter | EEJ33_14370 | Not Available | - | 3043862 - 3045139 | 47281.9 |
| atp-binding protein | EEJ33_14375 | Not Available | - | 3045501 - 3047861 | 88545.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


