Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf808 domain-containing protein | EEJ33_14170 | Not Available | - | 3009492 - 3010427 | 32852.3 |
| hd-gyp domain-containing protein | EEJ33_14175 | Not Available | - | 3010540 - 3011922 | 51335.6 |
| cold-shock protein cspv | EEJ33_14180 | Not Available | + | 3012272 - 3012484 | 7598.97 |
| hypothetical protein | EEJ33_14185 | Not Available | + | 3012663 - 3012872 | 8198.91 |
| hypothetical protein | EEJ33_14190 | Not Available | + | 3013053 - 3013409 | 13207.0 |
| duf2817 domain-containing protein | EEJ33_14195 | Not Available | + | 3013621 - 3014559 | 34181.2 |
| arac family transcriptional regulator | EEJ33_14200 | Not Available | - | 3014548 - 3015339 | 30266.3 |
| dmt family transporter | EEJ33_14205 | Not Available | + | 3015439 - 3016338 | 32501.8 |
| deor/glpr family transcriptional regulator | EEJ33_14215 | Not Available | + | 3016931 - 3017692 | 28089.6 |
| acyl-coa thioesterase | EEJ33_14220 | Not Available | + | 3017856 - 3018344 | 17755.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


