Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heme abc transporter atp-binding protein | EEJ33_14120 | Not Available | + | 2998005 - 2998784 | 28367.4 |
| tetr/acrr family transcriptional regulator | EEJ33_14125 | Not Available | - | 2998948 - 2999433 | 18762.6 |
| duf406 family protein | EEJ33_14130 | Not Available | + | 2999930 - 3000232 | 10927.0 |
| hypothetical protein | EEJ33_14135 | Not Available | + | 3000354 - 3000953 | 21429.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | EEJ33_14140 | Not Available | - | 3001010 - 3002128 | 42356.0 |
| arac family transcriptional regulator | EEJ33_14145 | Not Available | + | 3002294 - 3002902 | 23270.4 |
| methyl-accepting chemotaxis protein | EEJ33_14150 | Not Available | + | 3003049 - 3004920 | 66937.3 |
| mosc domain-containing protein | EEJ33_14155 | Not Available | - | 3004983 - 3006800 | 67283.7 |
| dihydroorotase | EEJ33_14160 | Not Available | + | 3007167 - 3008195 | 37598.1 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | EEJ33_14165 | Not Available | - | 3008245 - 3009378 | 42247.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


