Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerate kinase | EEJ33_14070 | Not Available | - | 2988176 - 2989309 | 39350.4 |
| methyl-accepting chemotaxis protein | EEJ33_14075 | Not Available | - | 2989526 - 2991262 | 63716.0 |
| heme utilization protein hutz | EEJ33_14080 | Not Available | - | 2991563 - 2992093 | 20301.2 |
| heme utilization cystosolic carrier protein hutx | EEJ33_14085 | Not Available | - | 2992118 - 2992621 | 18775.7 |
| heme anaerobic degradation radical sam methyltransferase chuw/hutw | EEJ33_14090 | Not Available | - | 2992646 - 2994013 | 51587.0 |
| energy transducer tonb | EEJ33_14095 | Not Available | + | 2994270 - 2995019 | 27116.7 |
| mota/tolq/exbb proton channel family protein | EEJ33_14100 | Not Available | + | 2995019 - 2995705 | 24630.5 |
| biopolymer transporter exbd | EEJ33_14105 | Not Available | + | 2995702 - 2996118 | 15249.5 |
| hemin abc transporter substrate-binding protein | EEJ33_14110 | Not Available | + | 2996129 - 2996962 | 29268.6 |
| iron abc transporter permease | EEJ33_14115 | Not Available | + | 2996974 - 2998005 | 36008.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


