Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | EEJ33_13910 | Not Available | - | 2953119 - 2953331 | 7448.89 |
| hypothetical protein | EEJ33_13975 | Not Available | + | 2965783 - 2968818 | 115432.0 |
| hypothetical protein | EEJ33_13980 | Not Available | + | 2969018 - 2969206 | 6956.7 |
| l-threonine 3-dehydrogenase | EEJ33_13985 | Not Available | - | 2969187 - 2970218 | 37571.8 |
| glycine c-acetyltransferase | EEJ33_13990 | Not Available | - | 2970221 - 2971414 | 43290.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EEJ33_13995 | Not Available | + | 2971768 - 2973036 | 46019.1 |
| lysr family transcriptional regulator | EEJ33_14000 | Not Available | + | 2973183 - 2974121 | 34553.0 |
| voc family protein | EEJ33_14005 | Not Available | + | 2974115 - 2974498 | 14347.0 |
| pepsy domain-containing protein | EEJ33_14010 | Not Available | - | 2974576 - 2975988 | 52031.1 |
| hypothetical protein | EEJ33_14015 | Not Available | - | 2976224 - 2976622 | 14662.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


