Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l3 | EEJ33_13810 | Not Available | - | 2935624 - 2936253 | 22342.0 |
| 30s ribosomal protein s10 | EEJ33_13815 | Not Available | - | 2936268 - 2936579 | 11708.3 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | EEJ33_13820 | Not Available | - | 2937016 - 2937759 | 26585.3 |
| ribonuclease r | EEJ33_13825 | Not Available | - | 2937767 - 2940232 | 93416.3 |
| duf3413 domain-containing protein | EEJ33_13830 | Not Available | + | 2940376 - 2942244 | 71945.9 |
| sel1 repeat family protein | EEJ33_13835 | Not Available | - | 2942271 - 2942906 | 24225.0 |
| histidine kinase | EEJ33_13840 | Not Available | + | 2943016 - 2943132 | 4194.97 |
| adenylosuccinate synthase | EEJ33_13845 | Not Available | - | 2943114 - 2944412 | 46835.3 |
| isoaspartyl peptidase/l-asparaginase | EEJ33_13850 | Not Available | - | 2944539 - 2945519 | 35080.3 |
| peptidylprolyl isomerase | EEJ33_13855 | Not Available | - | 2945682 - 2946180 | 17289.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


