Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | EEJ33_13660 | Not Available | + | 2919895 - 2920788 | 32734.1 |
| lysine transporter lysm | EEJ33_13665 | Not Available | - | 2920738 - 2921304 | 21730.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EEJ33_13670 | Not Available | + | 2921530 - 2922150 | 21848.1 |
| duf2780 domain-containing protein | EEJ33_13675 | Not Available | + | 2922284 - 2922766 | 17313.8 |
| 50s ribosomal protein l17 | EEJ33_13680 | Not Available | - | 2922910 - 2923296 | 14405.5 |
| dna-directed rna polymerase subunit alpha | EEJ33_13685 | Not Available | - | 2923323 - 2924315 | 36417.6 |
| 30s ribosomal protein s4 | EEJ33_13690 | Not Available | - | 2924340 - 2924960 | 23284.3 |
| 30s ribosomal protein s11 | EEJ33_13695 | Not Available | - | 2924988 - 2925377 | 13890.8 |
| 30s ribosomal protein s13 | EEJ33_13700 | Not Available | - | 2925397 - 2925753 | 13272.4 |
| 50s ribosomal protein l36 | EEJ33_13705 | Not Available | - | 2925903 - 2926016 | 4278.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


