Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3299 domain-containing protein | EEJ33_13610 | Not Available | + | 2909067 - 2909588 | 19450.5 |
| tigr03899 family protein | EEJ33_13615 | Not Available | + | 2909900 - 2910799 | 33847.5 |
| adenylyl-sulfate kinase | EEJ33_13620 | Not Available | - | 2910880 - 2911527 | 23942.5 |
| sulfate adenylyltransferase subunit cysn | EEJ33_13625 | Not Available | - | 2911538 - 2912968 | 52874.9 |
| sulfate adenylyltransferase subunit 2 | EEJ33_13630 | Not Available | - | 2912986 - 2913894 | 35044.9 |
| uroporphyrinogen-iii c-methyltransferase | EEJ33_13635 | Not Available | - | 2913997 - 2914896 | 31815.4 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | EEJ33_13640 | Not Available | + | 2915182 - 2917143 | 71834.9 |
| crp/fnr family transcriptional regulator | EEJ33_13645 | Not Available | + | 2917263 - 2917832 | 22028.6 |
| atp-dependent rna helicase dbpa | EEJ33_13650 | Not Available | - | 2917835 - 2919217 | 49987.3 |
| gnat family n-acetyltransferase | EEJ33_13655 | Not Available | + | 2919443 - 2919892 | 16822.1 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


