Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inorganic pyrophosphatase | EEJ33_13560 | Not Available | + | 2897793 - 2898323 | 19601.3 |
| gamma-glutamylcyclotransferase | EEJ33_13565 | Not Available | - | 2898382 - 2898729 | 13387.6 |
| translocation/assembly module tamb | EEJ33_13570 | Not Available | - | 2898740 - 2902522 | 137708.0 |
| outer membrane protein assembly factor | EEJ33_13575 | Not Available | - | 2902519 - 2904267 | 65711.2 |
| peptide-methionine (s)-s-oxide reductase msra | EEJ33_13580 | Not Available | + | 2904413 - 2905051 | 23489.6 |
| ytfj family protein | EEJ33_13585 | Not Available | + | 2905133 - 2905684 | 19768.7 |
| duf2607 domain-containing protein | EEJ33_13590 | Not Available | + | 2905892 - 2906197 | 11454.9 |
| duf2796 domain-containing protein | EEJ33_13595 | Not Available | + | 2906247 - 2906960 | 26933.8 |
| abc transporter atp-binding protein | EEJ33_13600 | Not Available | + | 2907042 - 2907758 | 26064.2 |
| abc transporter permease | EEJ33_13605 | Not Available | + | 2907755 - 2909014 | 45402.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


