Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter | EEJ33_13510 | Not Available | + | 2887164 - 2888525 | 49139.5 |
| metalloprotease pmba | EEJ33_13515 | Not Available | - | 2888598 - 2889941 | 48191.1 |
| ribosome-associated protein | EEJ33_13520 | Not Available | + | 2890040 - 2890621 | 22412.9 |
| thiamine abc transporter atp-binding protein | EEJ33_13525 | Not Available | - | 2890726 - 2891442 | 26336.9 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | EEJ33_13530 | Not Available | - | 2891454 - 2893046 | 58997.6 |
| thiamine abc transporter substrate binding subunit | EEJ33_13535 | Not Available | - | 2893056 - 2894048 | 36350.0 |
| ubix family flavin prenyltransferase | EEJ33_13540 | Not Available | - | 2894310 - 2894945 | 22704.6 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | EEJ33_13545 | Not Available | - | 2894952 - 2896307 | 49433.3 |
| hypothetical protein | EEJ33_13550 | Not Available | + | 2896296 - 2896559 | 9687.87 |
| class 1 fructose-bisphosphatase | EEJ33_13555 | Not Available | + | 2896613 - 2897623 | 37343.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


