Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf898 domain-containing protein | EEJ33_13350 | Not Available | - | 2860536 - 2861708 | 43261.9 |
| d-2-hydroxyacid dehydrogenase | EEJ33_13355 | Not Available | - | 2861834 - 2862811 | 35475.0 |
| rna pseudouridine synthase | EEJ33_13360 | Not Available | - | 2862851 - 2863588 | 28751.5 |
| rna polymerase-associated protein rapa | EEJ33_13365 | Not Available | - | 2863685 - 2866594 | 109460.0 |
| hypothetical protein | EEJ33_13370 | Not Available | + | 2866593 - 2866811 | 8359.61 |
| phoh family protein | EEJ33_13375 | Not Available | + | 2867015 - 2868391 | 51364.4 |
| ornithine carbamoyltransferase | EEJ33_13380 | Not Available | + | 2868541 - 2869545 | 37320.8 |
| aspartate carbamoyltransferase | EEJ33_13390 | Not Available | + | 2869795 - 2870724 | 34350.8 |
| aspartate carbamoyltransferase regulatory subunit | EEJ33_13395 | Not Available | + | 2870736 - 2871203 | 17276.0 |
| rida family protein | EEJ33_13400 | Not Available | + | 2871308 - 2871697 | 13688.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


