Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | + | 2847761 - 2849313 | Not Available |
| hd-gyp domain-containing protein | EEJ33_13305 | Not Available | - | 2849807 - 2851060 | 47357.2 |
| Trna-leu | Not Available | Not Available | + | 2851227 - 2851311 | Not Available |
| rdd family protein | EEJ33_13315 | Not Available | + | 2851493 - 2851975 | 17774.1 |
| lipopolysaccharide abc transporter permease lptg | EEJ33_13320 | Not Available | - | 2852080 - 2853150 | 39181.5 |
| lps export abc transporter permease lptf | EEJ33_13325 | Not Available | - | 2853154 - 2854254 | 40908.4 |
| cytosol aminopeptidase | EEJ33_13330 | Not Available | + | 2854448 - 2855959 | 54590.9 |
| dna polymerase iii subunit chi | EEJ33_13335 | Not Available | + | 2856043 - 2856492 | 16906.9 |
| valine--trna ligase | EEJ33_13340 | Not Available | + | 2856586 - 2859447 | 108155.0 |
| zn-dependent protease | EEJ33_13345 | Not Available | - | 2859541 - 2860536 | 36817.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


