Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | EEJ33_13250 | Not Available | + | 2839707 - 2840798 | 39475.2 |
| 3-isopropylmalate dehydratase large subunit | EEJ33_13255 | Not Available | + | 2840856 - 2842259 | 50174.0 |
| 3-isopropylmalate dehydratase small subunit | EEJ33_13260 | Not Available | + | 2842275 - 2842877 | 22460.5 |
| duf547 domain-containing protein | EEJ33_13265 | Not Available | + | 2842978 - 2843769 | 30169.6 |
| 5s ribosomal rna | Not Available | Not Available | + | 2843828 - 2843943 | Not Available |
| Trna-thr | Not Available | Not Available | + | 2843986 - 2844061 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 2844111 - 2844226 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 2844336 - 2847251 | Not Available |
| Trna-ala | Not Available | Not Available | + | 2847547 - 2847622 | Not Available |
| Trna-ile | Not Available | Not Available | + | 2847631 - 2847707 | Not Available |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


