Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate oxidase | EEJ33_13150 | Not Available | + | 2818854 - 2820506 | 61652.1 |
| hypothetical protein | EEJ33_13155 | Not Available | - | 2820531 - 2820893 | 13937.1 |
| succinate dehydrogenase assembly factor 2 family protein | EEJ33_13160 | Not Available | - | 2820925 - 2821185 | 9853.88 |
| pp_02508 | EEJ33_13165 | Not Available | + | 2821338 - 2822309 | Not Available |
| duf1107 domain-containing protein | EEJ33_13170 | Not Available | + | 2822944 - 2823150 | 8096.07 |
| fad-dependent 2-octaprenylphenol hydroxylase | EEJ33_13175 | Not Available | - | 2823251 - 2824480 | 45112.5 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | EEJ33_13180 | Not Available | - | 2824492 - 2825700 | 44017.0 |
| yeca family protein | EEJ33_13185 | Not Available | - | 2825721 - 2826296 | 20564.4 |
| cell division protein zapa | EEJ33_13190 | Not Available | + | 2826538 - 2826846 | 11211.5 |
| Ncrna_class:other | Not Available | Not Available | + | 2826859 - 2827042 | Not Available |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


