Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein reco | EEJ33_13100 | Not Available | - | 2810373 - 2811098 | 27146.0 |
| gtpase era | EEJ33_13105 | Not Available | - | 2811168 - 2812142 | 37019.5 |
| ribonuclease 3 | EEJ33_13110 | Not Available | - | 2812135 - 2812812 | 25111.1 |
| signal peptidase i | EEJ33_13115 | Not Available | - | 2812844 - 2813740 | 33835.8 |
| elongation factor 4 | EEJ33_13120 | Not Available | - | 2813832 - 2815625 | 66016.8 |
| transcriptional regulator | EEJ33_13125 | Not Available | - | 2815738 - 2816208 | 16857.0 |
| sigma-e factor regulatory protein rseb | EEJ33_13130 | Not Available | - | 2816205 - 2817170 | 36166.4 |
| anti-sigma e factor | EEJ33_13135 | Not Available | - | 2817167 - 2817805 | 23557.9 |
| rna polymerase sigma factor rpoe | EEJ33_13140 | Not Available | - | 2817819 - 2818391 | 21462.5 |
| hypothetical protein | EEJ33_13145 | Not Available | - | 2818698 - 2818922 | 8694.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


