Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ctp synthetase | EEJ33_13050 | Not Available | - | 2796643 - 2798280 | 59889.1 |
| nucleoside triphosphate pyrophosphohydrolase | EEJ33_13055 | Not Available | - | 2798543 - 2799370 | 31772.5 |
| gtp diphosphokinase | EEJ33_13060 | Not Available | - | 2799470 - 2801686 | 83610.8 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EEJ33_13065 | Not Available | - | 2801750 - 2803072 | 49088.3 |
| two-component sensor histidine kinase bara | EEJ33_13070 | Not Available | + | 2803244 - 2806027 | 103632.0 |
| sensor domain-containing diguanylate cyclase | EEJ33_13075 | Not Available | - | 2806015 - 2807307 | 48893.1 |
| hypothetical protein | EEJ33_13080 | Not Available | - | 2807300 - 2807710 | 15536.8 |
| hypothetical protein | EEJ33_13085 | Not Available | - | 2807720 - 2809057 | 50189.0 |
| holo-acp synthase | EEJ33_13090 | Not Available | - | 2809260 - 2809640 | 13751.6 |
| pyridoxine 5'-phosphate synthase | EEJ33_13095 | Not Available | - | 2809645 - 2810376 | 26485.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


