Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zapd | EEJ33_12950 | Not Available | + | 2770798 - 2771538 | 28799.6 |
| dna gyrase inhibitor yacg | EEJ33_12955 | Not Available | + | 2771693 - 2771890 | 7369.5 |
| dna topoisomerase iv subunit a | EEJ33_12960 | Not Available | - | 2771939 - 2774224 | 85026.4 |
| dna topoisomerase iv subunit b | EEJ33_12965 | Not Available | - | 2774228 - 2776108 | 69469.9 |
| esterase yqia | EEJ33_12970 | Not Available | - | 2776437 - 2777024 | 22275.7 |
| 3',5'-cyclic-amp phosphodiesterase | EEJ33_12975 | Not Available | - | 2777026 - 2777844 | 30407.1 |
| duf1249 family protein | EEJ33_12980 | Not Available | - | 2777869 - 2778315 | 17046.5 |
| adp-ribose diphosphatase | EEJ33_12985 | Not Available | - | 2778322 - 2778948 | 23582.0 |
| outer membrane channel protein tolc | EEJ33_12990 | Not Available | + | 2779180 - 2780487 | 47507.5 |
| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase | EEJ33_12995 | Not Available | - | 2780605 - 2782035 | 50635.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


