Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | EEJ33_12900 | Not Available | - | 2761241 - 2761993 | 27348.0 |
| site-specific tyrosine recombinase xerd | EEJ33_12905 | Not Available | - | 2762010 - 2762918 | 34610.7 |
| flavodoxin fldb | EEJ33_12910 | Not Available | + | 2763057 - 2763575 | 19394.7 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | EEJ33_12915 | Not Available | - | 2763854 - 2764399 | 20614.6 |
| carboxylating nicotinate-nucleotide diphosphorylase | EEJ33_12920 | Not Available | + | 2764695 - 2765585 | 32095.6 |
| pilin | EEJ33_12925 | Not Available | + | 2765788 - 2766261 | 16581.7 |
| type iv-a pilus assembly atpase pilb | EEJ33_12930 | Not Available | + | 2766271 - 2767959 | 62065.9 |
| type ii secretion system f family protein | EEJ33_12935 | Not Available | + | 2768002 - 2769228 | 45117.2 |
| prepilin peptidase | EEJ33_12940 | Not Available | + | 2769286 - 2770161 | 32435.5 |
| dephospho-coa kinase | EEJ33_12945 | Not Available | + | 2770125 - 2770766 | 23627.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


