Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EEJ33_12750 | Not Available | - | 2720447 - 2721232 | 27294.3 |
| atp-binding protein | EEJ33_12755 | Not Available | - | 2721999 - 2723516 | 56576.0 |
| hypothetical protein | EEJ33_12760 | Not Available | + | 2723949 - 2724431 | 17625.8 |
| carbamoyl-phosphate synthase large subunit | EEJ33_12765 | Not Available | - | 2724521 - 2727751 | 117959.0 |
| carbamoyl-phosphate synthase small subunit | EEJ33_12770 | Not Available | - | 2727768 - 2728907 | 40836.6 |
| 4-hydroxy-tetrahydrodipicolinate reductase | EEJ33_12775 | Not Available | - | 2729390 - 2730199 | 28579.5 |
| 8-oxo-dgtp diphosphatase mutt | EEJ33_12780 | Not Available | - | 2730425 - 2730838 | 15603.3 |
| preprotein translocase subunit seca | EEJ33_12785 | Not Available | - | 2730988 - 2733699 | 102484.0 |
| duf721 domain-containing protein | EEJ33_12790 | Not Available | + | 2734053 - 2734526 | 17589.3 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | EEJ33_12795 | Not Available | - | 2734631 - 2735548 | 33969.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


