Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase large subunit | EEJ33_12700 | Not Available | + | 2703117 - 2707709 | 168942.0 |
| glutamate synthase subunit beta | EEJ33_12705 | Not Available | + | 2707710 - 2709179 | 53434.0 |
| glutamate synthase large subunit | EEJ33_12710 | Not Available | + | 2709707 - 2714170 | 163468.0 |
| glutamate synthase small subunit | EEJ33_12715 | Not Available | + | 2714189 - 2715601 | 51985.3 |
| duf1499 domain-containing protein | EEJ33_12720 | Not Available | + | 2715788 - 2716222 | 16275.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | EEJ33_12725 | Not Available | + | 2716310 - 2717005 | 24526.6 |
| cobalamin biosynthesis family protein | EEJ33_12730 | Not Available | + | 2717018 - 2717971 | 34874.5 |
| vitamin b12 abc transporter substrate-binding protein btuf | EEJ33_12735 | Not Available | + | 2717972 - 2718802 | 31107.3 |
| trimeric intracellular cation channel family protein | EEJ33_12740 | Not Available | + | 2718885 - 2719505 | 22058.0 |
| lysr family transcriptional regulator | EEJ33_12745 | Not Available | + | 2719657 - 2720517 | 31194.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


