Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homoserine kinase | EEJ33_12650 | Not Available | - | 2690920 - 2691876 | 34243.2 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | EEJ33_12655 | Not Available | - | 2691897 - 2694356 | 88585.6 |
| thr operon leader peptide | EEJ33_12660 | Not Available | - | 2694442 - 2694555 | 4015.96 |
| hypothetical protein | EEJ33_12665 | Not Available | + | 2694907 - 2695389 | 17505.5 |
| putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase | EEJ33_12670 | Not Available | - | 2695386 - 2695874 | 17849.5 |
| duf3293 domain-containing protein | EEJ33_12675 | Not Available | - | 2695895 - 2696284 | 15206.0 |
| two-component system response regulator arca | EEJ33_12680 | Not Available | + | 2696599 - 2697315 | 27120.4 |
| aerobic respiration two-component sensor histidine kinase arcb | EEJ33_12685 | Not Available | - | 2697376 - 2699733 | 88611.5 |
| diguanylate cyclase | EEJ33_12690 | Not Available | - | 2699840 - 2701579 | 65566.5 |
| tigr01212 family radical sam protein | EEJ33_12695 | Not Available | - | 2701647 - 2702585 | 34761.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


