Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nupc/nupg family nucleoside cnt transporter | EEJ33_12600 | Not Available | - | 2680509 - 2681753 | 43173.7 |
| tatd family deoxyribonuclease | EEJ33_12605 | Not Available | - | 2681940 - 2682791 | 31489.3 |
| peroxide stress protein yaaa | EEJ33_12610 | Not Available | - | 2682906 - 2683679 | 28837.4 |
| alanine:cation symporter family protein | EEJ33_12615 | Not Available | - | 2683843 - 2685273 | 51308.4 |
| duf3545 family protein | EEJ33_12620 | Not Available | + | 2685912 - 2686145 | 9351.61 |
| hemerythrin domain-containing protein | EEJ33_12625 | Not Available | - | 2686292 - 2686843 | 21891.9 |
| uracil-dna glycosylase | EEJ33_12630 | Not Available | - | 2686933 - 2687613 | 25463.4 |
| deoxyribonuclease iv | EEJ33_12635 | Not Available | - | 2687980 - 2688840 | 31808.0 |
| autonomous glycyl radical cofactor grca | EEJ33_12640 | Not Available | + | 2689186 - 2689563 | 13910.4 |
| threonine synthase | EEJ33_12645 | Not Available | - | 2689643 - 2690923 | 46301.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


