Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | EEJ33_12550 | Not Available | - | 2667449 - 2669536 | 76504.6 |
| dna repair protein rada | EEJ33_12555 | Not Available | - | 2669809 - 2671185 | 49378.9 |
| pilz domain-containing protein | EEJ33_12560 | Not Available | + | 2671316 - 2673655 | 89157.4 |
| phosphoserine phosphatase | EEJ33_12565 | Not Available | - | 2673860 - 2674846 | 36124.7 |
| smp protein | EEJ33_12570 | Not Available | + | 2674943 - 2675566 | 22966.0 |
| purine-nucleoside phosphorylase | EEJ33_12575 | Not Available | - | 2675647 - 2676372 | 26125.5 |
| phosphopentomutase | EEJ33_12580 | Not Available | - | 2676455 - 2677675 | 44155.1 |
| thymidine phosphorylase | EEJ33_12585 | Not Available | - | 2677693 - 2679039 | 47845.6 |
| 2-deoxyribose-5-phosphate aldolase | EEJ33_12590 | Not Available | - | 2679127 - 2679906 | 27974.7 |
| hypothetical protein | EEJ33_12595 | Not Available | + | 2680014 - 2680196 | 6344.77 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


