Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | EEJ33_12500 | Not Available | - | 2653563 - 2654654 | 40897.2 |
| atp-grasp domain-containing protein | EEJ33_12505 | Not Available | + | 2654858 - 2656309 | 55658.2 |
| zinc transporter zntb | EEJ33_12510 | Not Available | + | 2656542 - 2657483 | 35706.7 |
| gamma-glutamylcyclotransferase | EEJ33_12515 | Not Available | + | 2657467 - 2658054 | 21970.2 |
| pp_02380 | EEJ33_12520 | Not Available | - | 2658051 - 2658395 | Not Available |
| laci family dna-binding transcriptional regulator | EEJ33_12525 | Not Available | + | 2658554 - 2659561 | 36552.6 |
| beta-galactosidase | EEJ33_12530 | Not Available | - | 2659573 - 2662650 | 118223.0 |
| chromate efflux transporter | EEJ33_12535 | Not Available | + | 2663034 - 2664176 | 40346.4 |
| hd-gyp domain-containing protein | EEJ33_12540 | Not Available | + | 2664293 - 2665447 | 44021.5 |
| amp-dependent synthetase | EEJ33_12545 | Not Available | + | 2665644 - 2667335 | 63284.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


