Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino-acid n-acetyltransferase | EEJ33_12445 | Not Available | + | 2636795 - 2638132 | 49443.2 |
| hypothetical protein | EEJ33_12450 | Not Available | + | 2638360 - 2638545 | 7048.5 |
| exodeoxyribonuclease v subunit alpha | EEJ33_12455 | Not Available | - | 2638575 - 2640695 | 77913.4 |
| exodeoxyribonuclease v subunit beta | EEJ33_12460 | Not Available | - | 2640692 - 2644318 | 136100.0 |
| exodeoxyribonuclease v subunit gamma | EEJ33_12465 | Not Available | - | 2644582 - 2648028 | 131075.0 |
| lysr family transcriptional regulator | EEJ33_12475 | Not Available | + | 2649332 - 2650246 | 34292.6 |
| hydroxyacid dehydrogenase | EEJ33_12480 | Not Available | + | 2650362 - 2650673 | 11352.3 |
| hypothetical protein | EEJ33_12485 | Not Available | + | 2650908 - 2651102 | 7307.96 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EEJ33_12490 | Not Available | + | 2651105 - 2652136 | 35693.9 |
| short-chain dehydrogenase | EEJ33_12495 | Not Available | - | 2652216 - 2653460 | 46250.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


