Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | EEJ33_12395 | Not Available | - | 2628262 - 2628846 | 22521.1 |
| atp-dependent protease | EEJ33_12400 | Not Available | - | 2628936 - 2629517 | 22284.0 |
| hypothetical protein | EEJ33_12405 | Not Available | + | 2629845 - 2630651 | 29991.1 |
| 2-dehydropantoate 2-reductase | EEJ33_12410 | Not Available | + | 2630791 - 2631681 | 32374.0 |
| dj-1/pfpi family protein | EEJ33_12415 | Not Available | + | 2631666 - 2632283 | 21799.5 |
| cysteine desulfurase csda | EEJ33_12420 | Not Available | + | 2632270 - 2633481 | 43294.7 |
| cysteine desulfurase sulfur acceptor subunit csde | EEJ33_12425 | Not Available | - | 2633589 - 2634023 | 15906.1 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | EEJ33_12430 | Not Available | - | 2634028 - 2634843 | 29573.7 |
| murein transglycosylase a | EEJ33_12435 | Not Available | - | 2634940 - 2636058 | 40826.2 |
| duf2850 domain-containing protein | EEJ33_12440 | Not Available | - | 2636132 - 2636536 | 15514.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


