Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | EEJ33_12345 | Not Available | - | 2618797 - 2619429 | 22710.6 |
| na(+)-translocating nadh-quinone reductase subunit c | EEJ33_12350 | Not Available | - | 2619429 - 2620202 | 27517.8 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | EEJ33_12355 | Not Available | - | 2620189 - 2621436 | 45359.8 |
| na(+)-translocating nadh-quinone reductase subunit a | EEJ33_12360 | Not Available | - | 2621442 - 2622782 | 48712.9 |
| protein bola | EEJ33_12365 | Not Available | - | 2623267 - 2623587 | 12066.3 |
| class i sam-dependent methyltransferase | EEJ33_12370 | Not Available | + | 2623752 - 2624882 | 42064.8 |
| hypothetical protein | EEJ33_12375 | Not Available | + | 2624924 - 2625499 | 20859.8 |
| peptidyl-prolyl cis-trans isomerase | EEJ33_12380 | Not Available | + | 2625492 - 2626040 | 19931.8 |
| mfs transporter | EEJ33_12385 | Not Available | + | 2626109 - 2627497 | 51492.4 |
| transcriptional regulator | EEJ33_12390 | Not Available | - | 2627585 - 2628265 | 24728.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


