Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinylglutamate desuccinylase/aspartoacylase family protein | EEJ33_12295 | Not Available | + | 2608997 - 2610085 | 39811.4 |
| sodium-dependent transporter | EEJ33_12300 | Not Available | - | 2610154 - 2611509 | 49013.2 |
| diguanylate cyclase | EEJ33_12305 | Not Available | - | 2611666 - 2613183 | 57339.6 |
| duf2884 family protein | EEJ33_12310 | Not Available | - | 2613245 - 2614015 | 29169.9 |
| hypothetical protein | EEJ33_12315 | Not Available | + | 2614060 - 2614242 | 7059.39 |
| dna polymerase iv | EEJ33_12320 | Not Available | - | 2614345 - 2615424 | 40755.4 |
| (na+)-nqr maturation nqrm | EEJ33_12325 | Not Available | - | 2615533 - 2615766 | 8336.33 |
| fad:protein fmn transferase | EEJ33_12330 | Not Available | - | 2615783 - 2616787 | 36852.0 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | EEJ33_12335 | Not Available | - | 2616933 - 2618159 | 45143.2 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | EEJ33_12340 | Not Available | - | 2618193 - 2618789 | 21529.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


