Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator nrdr | EEJ33_12245 | Not Available | - | 2598381 - 2598830 | 17032.6 |
| glutamate-5-semialdehyde dehydrogenase | EEJ33_12250 | Not Available | - | 2598930 - 2600183 | 44663.9 |
| glutamate 5-kinase | EEJ33_12255 | Not Available | - | 2600192 - 2601325 | 40153.4 |
| crl family rna polymerase assembly factor | EEJ33_12260 | Not Available | - | 2601446 - 2601835 | 14940.7 |
| esterase frsa | EEJ33_12265 | Not Available | - | 2601970 - 2603217 | 46768.9 |
| xanthine phosphoribosyltransferase | EEJ33_12270 | Not Available | - | 2603314 - 2603778 | 17652.3 |
| ncs2 family permease | EEJ33_12275 | Not Available | - | 2603816 - 2605108 | 44926.3 |
| aminoacyl-histidine dipeptidase | EEJ33_12280 | Not Available | + | 2605986 - 2607458 | 53799.9 |
| atp-dependent zinc protease | EEJ33_12285 | Not Available | + | 2607692 - 2608135 | 17069.8 |
| 30s ribosomal protein s6--l-glutamate ligase | EEJ33_12290 | Not Available | + | 2608132 - 2609037 | 32471.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


