Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | EEJ33_12195 | Not Available | + | 2588382 - 2589224 | 31315.7 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | EEJ33_12200 | Not Available | + | 2589314 - 2591959 | 102084.0 |
| duf3461 family protein | EEJ33_12205 | Not Available | + | 2592235 - 2592618 | 14741.0 |
| phosphatidylglycerophosphatase a | EEJ33_12210 | Not Available | - | 2592659 - 2593177 | 19097.7 |
| thiamine-phosphate kinase | EEJ33_12215 | Not Available | - | 2593174 - 2594178 | 36740.9 |
| transcription antitermination factor nusb | EEJ33_12220 | Not Available | - | 2594239 - 2594709 | 17676.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | EEJ33_12225 | Not Available | - | 2594709 - 2595179 | 16433.8 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | EEJ33_12230 | Not Available | - | 2595444 - 2596553 | 40412.6 |
| riboflavin synthase | EEJ33_12235 | Not Available | - | 2596594 - 2597247 | 23561.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | EEJ33_12240 | Not Available | - | 2597252 - 2598355 | 40096.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


