Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chaperone protein skp | EEJ33_12145 | Not Available | - | 2577515 - 2578024 | 18953.1 |
| outer membrane protein assembly factor bama | EEJ33_12150 | Not Available | - | 2578039 - 2580444 | 89925.4 |
| sigma e protease regulator rsep | EEJ33_12155 | Not Available | - | 2580493 - 2581851 | 49106.9 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EEJ33_12160 | Not Available | - | 2581848 - 2583056 | 43646.0 |
| cdp-diglyceride synthetase | EEJ33_12165 | Not Available | - | 2583105 - 2583947 | 30953.9 |
| di-trans,poly-cis-decaprenylcistransferase | EEJ33_12170 | Not Available | - | 2583965 - 2584735 | 29047.2 |
| ribosome recycling factor | EEJ33_12175 | Not Available | - | 2584809 - 2585366 | 20653.0 |
| ump kinase | EEJ33_12180 | Not Available | - | 2585420 - 2586151 | 26227.0 |
| elongation factor ts | EEJ33_12185 | Not Available | - | 2586339 - 2587181 | 29729.9 |
| 30s ribosomal protein s2 | EEJ33_12190 | Not Available | - | 2587313 - 2588041 | 26810.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


