Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phenolic acid decarboxylase | EEJ33_12095 | Not Available | - | 2565940 - 2566464 | 19933.6 |
| cytochrome c | EEJ33_12100 | Not Available | - | 2566841 - 2567164 | 10854.4 |
| trna lysidine(34) synthetase tils | EEJ33_12105 | Not Available | - | 2567200 - 2568522 | 49883.1 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | EEJ33_12110 | Not Available | - | 2568646 - 2569605 | 35605.9 |
| dna polymerase iii subunit alpha | EEJ33_12115 | Not Available | - | 2569660 - 2573139 | 130113.0 |
| ribonuclease hii | EEJ33_12120 | Not Available | - | 2573178 - 2573798 | 22369.5 |
| lipid-a-disaccharide synthase | EEJ33_12125 | Not Available | - | 2573823 - 2574962 | 42284.8 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | EEJ33_12130 | Not Available | - | 2575123 - 2575911 | 28496.4 |
| beta-hydroxyacyl-acp dehydratase | EEJ33_12135 | Not Available | - | 2575913 - 2576374 | 17293.1 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | EEJ33_12140 | Not Available | - | 2576450 - 2577505 | 36996.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


