Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-sedoheptulose 7-phosphate isomerase | EEJ33_12045 | Not Available | - | 2555220 - 2555795 | 20647.7 |
| acyl-coa dehydrogenase | EEJ33_12050 | Not Available | + | 2556113 - 2558557 | 88990.4 |
| tigr03503 family protein | EEJ33_12055 | Not Available | - | 2558704 - 2559963 | 47736.9 |
| dna polymerase iii subunit epsilon | EEJ33_12060 | Not Available | - | 2559972 - 2560715 | 27653.8 |
| ribonuclease hi | EEJ33_12065 | Not Available | + | 2560772 - 2561242 | 18017.4 |
| class i sam-dependent methyltransferase | EEJ33_12070 | Not Available | - | 2561313 - 2562050 | 28439.4 |
| hydroxyacylglutathione hydrolase | EEJ33_12075 | Not Available | + | 2562088 - 2562846 | 28317.8 |
| lysm peptidoglycan-binding domain-containing protein | EEJ33_12080 | Not Available | + | 2562918 - 2564540 | 60135.7 |
| endonuclease/exonuclease/phosphatase family protein | EEJ33_12085 | Not Available | - | 2564529 - 2565374 | 31780.1 |
| nitrogen regulatory protein p-ii | EEJ33_12090 | Not Available | - | 2565442 - 2565786 | 12730.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


