Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trab/gumn family protein | EEJ33_11990 | Not Available | + | 2546504 - 2547400 | 33872.1 |
| Trna-pro | Not Available | Not Available | + | 2547575 - 2547651 | Not Available |
| duf3149 domain-containing protein | EEJ33_12000 | Not Available | + | 2547881 - 2548021 | 5164.5 |
| dna endonuclease smra | EEJ33_12005 | Not Available | + | 2548203 - 2548781 | 21825.6 |
| 23s rrna pseudouridine(2604) synthase rluf | EEJ33_12010 | Not Available | + | 2548811 - 2549833 | 38173.6 |
| ggdef domain-containing protein | EEJ33_12015 | Not Available | - | 2549928 - 2551466 | 59040.5 |
| uracil phosphoribosyltransferase | EEJ33_12025 | Not Available | - | 2551697 - 2552323 | 22681.8 |
| phosphoribosylformylglycinamidine cyclo-ligase | EEJ33_12030 | Not Available | + | 2552490 - 2553530 | 36820.2 |
| phosphoribosylglycinamide formyltransferase | EEJ33_12035 | Not Available | + | 2553533 - 2554171 | 23344.9 |
| class ii glutamine amidotransferase | EEJ33_12040 | Not Available | - | 2554312 - 2555157 | 31929.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


