Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal-body protein | EEJ33_11940 | Not Available | + | 2524100 - 2525233 | 42638.4 |
| amino acid adenylation domain-containing protein | EEJ33_11945 | Not Available | - | 2525370 - 2532611 | 269572.0 |
| siderophore-interacting protein | EEJ33_11950 | Not Available | - | 2532870 - 2533685 | 30470.5 |
| tonb-dependent siderophore receptor | EEJ33_11955 | Not Available | - | 2533989 - 2536052 | 76337.3 |
| fe3+-citrate abc transporter substrate-binding protein | EEJ33_11960 | Not Available | + | 2536659 - 2537165 | 19317.8 |
| ompa family protein | EEJ33_11965 | Not Available | - | 2537254 - 2538219 | 34315.3 |
| glutamate--trna ligase | EEJ33_11970 | Not Available | - | 2538515 - 2539939 | 53386.6 |
| copper-translocating p-type atpase | EEJ33_11975 | Not Available | + | 2540113 - 2542860 | 97575.1 |
| duf411 domain-containing protein | EEJ33_11980 | Not Available | + | 2542857 - 2543309 | 16676.0 |
| beta-n-acetylhexosaminidase | EEJ33_11985 | Not Available | - | 2543436 - 2546087 | 97966.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


