Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook assembly protein flgd | EEJ33_11890 | Not Available | - | 2517366 - 2518073 | 25023.8 |
| flagellar basal body rod protein flgc | EEJ33_11895 | Not Available | - | 2518091 - 2518507 | 15061.8 |
| flagellar basal body rod protein flgb | EEJ33_11900 | Not Available | - | 2518512 - 2518907 | 14170.7 |
| chemotaxis protein methyltransferase 1 | EEJ33_11905 | Not Available | - | 2519196 - 2520023 | 30890.7 |
| chemotaxis signal transduction protein chev | EEJ33_11910 | Not Available | - | 2520034 - 2520960 | 34280.5 |
| flagella basal body p-ring formation protein flga | EEJ33_11915 | Not Available | + | 2521017 - 2521784 | 27906.0 |
| flagellar biosynthesis anti-sigma factor flgm | EEJ33_11920 | Not Available | + | 2521915 - 2522238 | 11157.9 |
| flagellar protein flgn | EEJ33_11925 | Not Available | + | 2522318 - 2522749 | 15719.0 |
| flagellar biosynthesis protein flgp | EEJ33_11930 | Not Available | - | 2522859 - 2523293 | 16377.9 |
| hypothetical protein | EEJ33_11935 | Not Available | - | 2523304 - 2523939 | 23529.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


