Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellin | EEJ33_11840 | Not Available | - | 2504871 - 2506004 | 39987.6 |
| flagellin a | EEJ33_11845 | Not Available | - | 2506561 - 2507700 | 40388.3 |
| flagellar hook-associated protein flgl | EEJ33_11850 | Not Available | - | 2508109 - 2509302 | 44953.4 |
| flagellar hook-associated protein flgk | EEJ33_11855 | Not Available | - | 2509315 - 2511189 | 68732.9 |
| flagellar assembly peptidoglycan hydrolase flgj | EEJ33_11860 | Not Available | - | 2511368 - 2512306 | 34822.8 |
| flagellar p-ring protein | EEJ33_11865 | Not Available | - | 2512317 - 2513402 | 37695.6 |
| flagellar basal body l-ring protein flgh | EEJ33_11870 | Not Available | - | 2513493 - 2514278 | 27757.4 |
| flagellar basal-body rod protein flgg | EEJ33_11875 | Not Available | - | 2514293 - 2515081 | 28139.3 |
| flagellar basal body rod protein flgf | EEJ33_11880 | Not Available | - | 2515101 - 2515850 | 26794.1 |
| flagellar hook protein flge | EEJ33_11885 | Not Available | - | 2516033 - 2517337 | 46975.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


